BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A03SP1|AL429143
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1544 0.0
>3x_Contig1766
Length = 23951
Score = 1544 bits (774), Expect = 0.0
Identities = 793/803 (98%), Gaps = 1/803 (0%)
Strand = Plus / Plus
Query: 3 gtctgctatgaccaccaacccttcaatatcatggtcgtgatttaataaccaacggggagt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9774 gtctgctatgaccaccaacccttcaatatcatggtcgtgatttaataaccaacggggagt 9833
Query: 63 ctcaacaataacaaacgaccctaaaaataacagcaagcccataacacattgaatgaacaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9834 ctcaacaataacaaacgaccctaaaaataacagcaagcccataacacattgaatgaacaa 9893
Query: 123 gggtaatctccaagaagtatctgattctatataggagchcgcataatcgacccaaacact 182
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9894 gggtaatctccaagaagtatctgattctatataggagcacgcataatcgacccaaacact 9953
Query: 183 agacgcataaccaacaatatttcctgtwaactcaatgcaagccaattttcctctgttatg 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 9954 agacgcataaccaacaatatttcctgtaaactcaatgcaagccaattttcctctgttatg 10013
Query: 243 tggggggctaatttctgattgataaatgggtacaatggtacttaataaaccaacaccaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10014 tggggggctaatttctgattgataaatgggtacaatggtacttaataaaccaacaccaat 10073
Query: 303 accactaatgattctaccaaatatcatatgacccatttcccatgahaacgtctgahccaa 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 10074 accactaatgattctaccaaatatcatatgacccatttcccatgaaaacgtctgaaccaa 10133
Query: 363 tccacctaaaatgaaaattaaagatccatattttatagtgaaccttctaccgaatttttc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10134 tccacctaaaatgaaaattaaagatccatattttatagtgaaccttctaccgaatttttc 10193
Query: 423 accaatattggagactagtaaggrggaaacaagagctccaatctcaagaattgagaccat 482
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10194 accaatattggagactagtaaggaggaaacaagagctccaatctcaagaattgagaccat 10253
Query: 483 agtaccaatagttgccgcagttgggttattganataagtcttgaaatatgggccagtgat 542
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 10254 agtaccaatagttgccgcagttgggttattgaaataagtcttgaaatatgggccagtgat 10313
Query: 543 aataccagacataacaccttgatcgtagccaaacaaaaatacgcctagtgacacaaatat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10314 aataccagacataacaccttgatcgtagccaaacaaaaatacgcctagtgacacaaatat 10373
Query: 603 cgatgtgaagtacaatagagttcttcccgtcaaataagtatccttaacctgtgagtkatc 662
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 10374 cgatgtgaagtacaatagagttcttcccgtcaaataagtatccttaacctgtaagtgatc 10433
Query: 663 agtgtagctaggtggaatacgttgttgatctaatggttgaacatttggaggaattacaat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10434 agtgtagctaggtggaatacgttgttgatctaatggttgaacatttggaggaattacaat 10493
Query: 723 tccgttagttccgccaacggcattttggaatgttgaaactgtttctaaattgtagctgat 782
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10494 tccgttagttccgccaacggca-tttggaatgttgaaactgtttctaaattgtagctgat 10552
Query: 783 cagaattcttcaaagcagawtcc 805
||||||||||||||||||| |||
Sbjct: 10553 cagaattcttcaaagcagattcc 10575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5644
Number of Sequences: 1807
Number of extensions: 5644
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)